BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G05LP1|AL425753
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1289 1431 0.0
>3x_Contig1289
Length = 5567
Score = 1431 bits (721), Expect = 0.0
Identities = 750/755 (99%), Gaps = 4/755 (0%)
Strand = Plus / Plus
Query: 1 gatccaaatagagaaaacaatgaataacactgttcttgtaacttgcggas-tactgtctc 59
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4815 gatccaaatagagaaaacaatgaataacactgttcttgtaacttgcggagctactgtctc 4874
Query: 60 tttccccagactggtagaaacagtacttgatagatctgtcacagagaagttgaaagtttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4875 tttccccagactggtagaaacagtacttgatagatctgtcacagagaagttgaaagtttt 4934
Query: 120 agggtatggcagaattgtgatccagtacggacgtgggtttagtgatacatttttacaact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4935 agggtatggcagaattgtgatccagtacggacgtgggtttagtgatacatttttacaact 4994
Query: 180 agtagagaagcacctaggtctgtttacggagaagaagagctgtggcatcaaggttttgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4995 agtagagaagcacctaggtctgtttacggagaagaagagctgtggcatcaaggttttgga 5054
Query: 240 taagattgaaaaccttaaagtaatctctgtggatggaatagagatatgtgggttcgagtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 taagattgaaaaccttaaagtaatctctgtggatggaatagagatatgtgggttcgagtt 5114
Query: 300 ttcgcatgacatcgagaagttgattgcgaataatatagacttggtgatatcacatgcagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 ttcgcatgacatcgagaagttgattgcgaataatatagacttggtgatatcacatgcagg 5174
Query: 360 tacaggttcgattttggactctctgagagttgggaaaaaacttattgtggtggtgaacga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5175 tacaggttcgattttggactctctgagagttgggaaaaaacttattgtggtggtgaacga 5234
Query: 420 tacgttgatggataatcaccagcagttaatcgcagataagtttgaacaacagaaactttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5235 tacgttgatggataatcaccagcagttaatcgcagataagtttgaacaacagaaactttt 5294
Query: 480 gtggtctgtccacgcgaacacggaagaactacttcgggcattggatagaagtgaaaatga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5295 gtggtctgtccacgcgaacacggaagaactacttcgggcattggatagaagtgaaaatga 5354
Query: 540 ggaattgctaaagattgataatacttacaataaacaattcgaaaagctattatataacgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5355 ggaattgctaaagattgataatacttacaataaacaattcgaaaagctattatataacgt 5414
Query: 600 cgcgatagattgatatttcaatctacaggttgatccaccgga-gtttctcagattcgtta 658
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5415 cgcgatagattgatatttcaatctacaggttgatccaccggaggtttctcagattcgtta 5474
Query: 659 gtttgatcaattggatcggtggtaatagttggtgcaggaattgcaggggcagtgagggat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5475 gtttgatcaattggatcggtggtaatagttggtgcaggaattgcaggggcagtgagggat 5534
Query: 719 tcccaaatgttccccaaagtactcactactttcaa 753
|||| |||||||||| |||||||||||||||||||
Sbjct: 5535 tccc-aatgttcccc-aagtactcactactttcaa 5567
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5676
Number of Sequences: 1807
Number of extensions: 5676
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)